rs227269495 SNP Detail

Summary

• ID
  rs227269495
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4559537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCTGCCTCT GCCTCTGCCT
  CTGCCTCTGC CCACATAACA CTCCCAGACT CCTCTCCATC TTTAAGAACA GGTCTGTATG
  TTTTGATGCA TCAGGATCTG GAATCTCGCC TCGATTTGTA CTTGACCTGA TAACTGATAC
  TTTGCTTCCT ACAGCTACAA AATGCTTATT TACATAGATG CAGCTATGTT GTGGAACCAG
  K
  ATTCTCATTA CCTCCCTTGG CCACAACTTT TAAATGTTTC CTAGTAATTT GTGTTCTGCA
  AGGGATGAAA CAGAGCCAGT TCTGCAGAAA CTTGATAGTA CCCTCCCTGG GGAGCTTCTT
  GCTGCTCAGC TTCCTGAGCA CCGGCCACCC CAATCTTCCC TTCCAGTGTG GGCCCTCGGC
  ATGCGAGTTT CCTAAGTCTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873964	CHEV_12_4516345	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227269495					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4559537 () rs orientation: forward

Symbol	Name	Function Class
2900045O20Rik	RIKEN cDNA 2900045O20 gene	within coordinates
Rr265385	regulatory region 265385	63 bp proximal
Rr267453	regulatory region 267453	1538 bp distal