rs227284333 SNP Detail

Summary

• ID
  rs227284333
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:66952895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATTTGAAT CCTGGGTTAG
  CATTTAAGGA ATTCTGTGGC CTTCGTTCTG CAAGGCGGCC TGTCTCTGTC ATGGCTATCA
  TAACAGAAAA GGTGTAACGA GTTTCCTGTA GTGACTAGCC CATTGGGTCA TCTGATGACA
  GGTACAGTGA ATGCCAGAAG TGACAAGAGG ACTGATGCTT TTTGTGTGAG GTGAATCAGC
  Y
  GCGTGTTAGT TAGGGTAATA CTGACTTGGG GGTCTGGAGA AAATGAGGGG AATGTGATTA
  ACACAAGAGA AAGGGAGCCG CCGTGTGGGG GCATGTAGTA AGAGAGAATG GGTGTGAGCC
  ACCGTGTGGG TGCTGGGAAT TGAGCTCAGG ACCTCTGGAA GAGCAGTCAG TGCTCTTAAC
  CACTGAGCCA TCTCTCCAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323345123	CHEV_10_66579864	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227284333					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:66952895 () rs orientation: forward

Symbol	Name	Function Class
Gm67716	predicted gene, 67716	1473 bp downstream
Jmjd1c	jumonji domain containing 1C	within coordinates
Rr215833	regulatory region 215833	706 bp proximal