rs227301722 SNP Detail

Summary

• ID
  rs227301722
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:55969548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTATGTTT CCACTCGCAA TCATATATGT
  AGGTACCTTT GACCCCCATG GAAAAATTTC TAACATTCAG AACTGATAAC CGGAAGAAAA
  ATTCTTTTGA GAATGAAATG TTTCCCCTCA GTGGGCTCTT AAGCACGTTC TCCTCATACG
  Y
  GGCGTGCTAG CTGGATATCT TTTGGCATAA TGGTTACACG TTTGGCATGG ATAGCACACA
  GGTTGATATC TTCAAAAAGG CCAACCAGAT AGGCCTCACT TGCCTCCTGC AAAACACCAG
  TAGCTGCACT CTGGAAACGC AGATCTGTTT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325191245	CHEV_16_56149298	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227301722					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:55969548 () rs orientation: forward

Symbol	Name	Function Class
Gm49682	predicted gene, 49682	within coordinates
Senp7	SUMO1/sentrin specific peptidase 7	within coordinates