rs227315508 SNP Detail

Summary

• ID
  rs227315508
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79132750 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTGCAAA GTTTCAGAAT
  CAATTCAAGA AACAAAATAG CCCTGGTACC GAGTTCACTG GCCTCTGAAT AAGGTTTAAA
  GTGGGGCTTT GATGATACAA CTAAGACTGA AGAGAACTGT TACAGCCGAA TTCAATGAAA
  CAGAGAGCTG TTCATTTTAC ATTTTTGTTA GGGATTCTAA CTTTATACAA ATTCTTCAAA
  G
  CTATATATAC TGAAAGCCAA TGTTGGGTTA CTAACTGAAA TAATTCATGT GGTACTCACC
  CAAACTCCAT CAGAAGGTCT CCATTGTGTG GATCCCAGAC ATACACACGA GTGTCATAGG
  ATGCAGTAGC TAGCAATGCT CCATCAGGAG AAAAGTCACA AGCTACAACA TCATGGTGAT
  GACCTTCCAG CTTCCTAATC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323759389	CHEV_11_79055426	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227315508					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79132750 () rs orientation: forward

Symbol	Name	Function Class
Gm30470	predicted gene, 30470	within coordinates
Tssr109469	transcription start site region 109469	567 bp downstream
Tssr109470	transcription start site region 109470	1390 bp downstream
Tssr109471	transcription start site region 109471	1457 bp downstream
Tssr109472	transcription start site region 109472	1532 bp downstream
Wsb1	WD repeat and SOCS box-containing 1	within coordinates