rs227347804 SNP Detail

Summary

• ID
  rs227347804
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:171015967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAGC CGCAAGTCAA AACCAGTTTT
  R
  GGAAGGGTGA ACTATTCAGC TCTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320116984	CHEV_1_173118529	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227347804					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171015967 () rs orientation: forward

Symbol	Name	Function Class
Gm70111	predicted gene, 70111	1263 bp upstream
Pcp4l1	Purkinje cell protein 4-like 1	Intron
Rr423235	regulatory region 423235	within coordinates
Rr423236	regulatory region 423236	773 bp proximal
Rr423237	regulatory region 423237	1274 bp proximal
Rr423238	regulatory region 423238	1927 bp proximal