rs227355444 SNP Detail

Summary

• ID
  rs227355444
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:99510655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAGTTTCA GGAGTTGTTT
  CCTTCCACGG TGTGGGTTAC AGGAATCCAA TCCAGGATAT CCGACTTGAT GACAAAGCCC
  TTTACCTGCT GAGCCATTTT GACAGCTCAT TAAATACAAG TGTCCAAGAG TTTGTTTGGG
  GTCTTGCTTT AAGCTTCTTT GGATATAGAT CTAGACATGT GCCTTATTTA TTATTCTGTT
  R
  CTGAGAAGAG ACCCCATGAC CAAGGTAACT CTTATGAAAA AGAAAAGTAC TTAACTGGAG
  GCTTGCTTAC AGTATCAGAG GCTTAGTCCA TTTATCATAA TTGCAGGGAG TATGGTAGCA
  GGCAGGCCTG GTGTTGGAGA AATAGTTAAG AGTTACATCC TGACCCACCT GACCCGTAAG
  GGTGGGCGAA GACTGGGTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323136090	CHEV_9_99529021	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227355444					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99510655 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22198	CpG island 22198	947 bp proximal
Dzip1l	DAZ interacting protein 1-like	894 bp upstream
Gm68333	predicted gene, 68333	within coordinates
Rr206941	regulatory region 206941	345 bp proximal
Tssr86687	transcription start site region 86687	929 bp upstream
Tssr86688	transcription start site region 86688	1221 bp upstream
Tssr86689	transcription start site region 86689	1253 bp upstream