rs227361605 SNP Detail

Summary

• ID
  rs227361605
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:10991504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACATTCA GCTCTCTATT
  CCCATAAGCG TGGCAACAAT ATATCATCCT GGAGATTTAG GCTCACATAC TCATTCAAAA
  CACAGAACCA TTCTTAAAAC CACTTATTGA AAGGGAACAA TCCAGAGCCC TGAGTTAAAT
  ATAAGTCCTG TCATCATAGG TAATTATAAG TATTATTCAG TCAGCTCAAC CAGTTCGCCC
  Y
  GAGCACCACT GACACAAATG TATTAGGGTT AGGGGTGAAG CTCCTTGATA ACACCCCCTG
  CCTAGCATGT GCAAGACCCT GAGTTCAATC TGGAATATGG GTAACATCAT CAGCACATGA
  AATGCTAAAC TGGAACAGCA TCTTTGGGTC ATTCTTTTGA GTGCTAGAGG CAACCTTATC
  CTCATTTACA GGTCTGACTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324260882	CHEV_13_10940714	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227361605					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:10991504 () rs orientation: forward

Symbol	Name	Function Class
Rr270346	regulatory region 270346	497 bp proximal
Rr278201	regulatory region 278201	572 bp proximal