rs227365026 SNP Detail

Summary

• ID
  rs227365026
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:130299617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTTTCAGA ACTGAAATTC TCTCTTCATG
  GTTGCACATC TTTCTTTAAT GAGGGACTCA CAAATCGCAG TAAAGTCAAA AACATCAGTT
  AGATGCACTT TACTCCAGAG TCCCCATTAT TAAGCTTTTC GTGGCTGTAG TATATTTTCT
  A
  AATATAATTT ATTCGATGCA ATAGTTGACA AACATTCCAA AGGTGAAACA ATAAATATAA
  TAAGACTACC TTAGGTAATA TATGTTGTAA TGAGGCAAAA ATCATAAGAC AGTAATAAAG
  ATAAAATGAA GGATAAATGA TAATCTACGC                                 
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319971984	CHEV_1_132268457	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227365026					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:130299617 () rs orientation: forward

Symbol	Name	Function Class
Rr417908	regulatory region 417908	341 bp proximal
Rr417909	regulatory region 417909	448 bp proximal
Rr417910	regulatory region 417910	1897 bp proximal