rs227388246 SNP Detail

Summary

• ID
  rs227388246
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr16:38634138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACGT GCCCATAGGG CAGCTTCAAA
  G
  TACTGTGGTC AGTGCTTGAA CATCT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325150349	CHEV_16_38813889	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227388246					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:38634138 () rs orientation: forward

Symbol	Name	Function Class
Gm15803	predicted gene 15803	214 bp upstream
Rr515903	regulatory region 515903	929 bp distal
Rr515904	regulatory region 515904	1032 bp distal
Tex55	testis expressed 55	Intron