rs227419276 SNP Detail

Summary

• ID
  rs227419276
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33874867 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTCTGGT GGTGGCTGTG
  TTCCTTTGTC CTAGTTCCAA GGCTTGTGCA GGAACCCCAT GACTCTGCTC CACTCCCTGA
  GAAACCAGTT ATCCCCCTCC TAGACTTATA CCATTTGCAT GCATGTATAG AATTTCTTTT
  TTTTCAAGAC AGGATTTCTC TATGTAATCC CGGCCGTCCT GGAACTCACT CTGTAGACCA
  S
  GCTAGCCTCG AACTCAGAAA TCCCCCTACC TCTGCCTCCT GAGTGCTGGG ATTCTAAACT
  GTTTTTAAAA GAGGGTTCTC GCCAGGCGTG GTGGCATACG CCTTTAATCC CAGCACTTGG
  GAGGCAGAGG CAAGCAGCTG GTCTACAGAG TGAGTTCCAG GACAGCCAGG GCTACACAGA
  GAAACCCTGT CTCAAAAAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322148796	CHEV_7_34960461	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227419276					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33874867 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	270 bp upstream
Gm12783	predicted gene 12783	1316 bp upstream
Rr170512	regulatory region 170512	1867 bp distal
Rr380644	regulatory region 380644	245 bp upstream