rs227442124 SNP Detail

Summary

• ID
  rs227442124
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:26471822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACACAGTC TGACTTCTGT
  GTCAATGGAC TGACCTGACT CCATGTGTCT TGTAGAAAAA GCAACAATGT GATCTTTTGT
  CAGCTGTCCC TGCTTCTCAG GTCCCTGTAC TGTGCGGGCC ACAGTCACAC ACCTTCACAG
  ACTTTCCCAT TCTCTTTCTT AGACAAGGAT CTCCTCAGCC CTCAGGCCCT GAACTGAATG
  R
  CTCTGCTTAG ATTCTCCCAC ATTCCCCTGT AAGTCCTCCA CGGATCTCAT AAATACACAA
  AGCCTTCCTC ACCGATCAAG AAAGAACCCT TGCTGTGATT TTGTTTGAGT GTGGGTTGCT
  TGCTTGTTTG TTGAGACAGG ATCTCACTAT GTAGACCTGG TTGGTCTTGA GCTCACTAAA
  ACCCATCTGC CTCGACCTCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322122902	CHEV_7_27557416	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227442124					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:26471822 () rs orientation: forward

Symbol	Name	Function Class
Cyp2b19	cytochrome P450, family 2, subfamily b, polypeptide 19	within coordinates
D7Mit144	DNA segment, Chr 7, Massachusetts Institute of Technology 144	209 bp proximal
Gm51442	predicted gene, 51442	within coordinates
Rr643909	regulatory region 643909	845 bp proximal
Tssr65194	transcription start site region 65194	596 bp downstream