rs227465828 SNP Detail

Summary

• ID
  rs227465828
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:36896794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAA ACCATGTAAG CCCAAACCAG
  R
  GACAAGTGGT GGGAGGAAGG GCTCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325584892	CHEV_18_36923395	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227465828					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:36896794 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9876	CpG island 9876	1327 bp proximal
Dnd1	DND microRNA-mediated repression inhibitor 1	within coordinates
Gm58557	predicted gene, 58557	1732 bp upstream
Rr352750	regulatory region 352750	1993 bp distal
Rr352751	regulatory region 352751	1206 bp proximal
Wdr55	WD repeat domain 55	33 bp downstream