rs227467595 SNP Detail

Summary

• ID
  rs227467595
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:42011036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAAGAAGG ATAAGAAATA
  CCTTAGGAAA GGGGAGAATT TCCTTCCAGA ATCAGGCAGT TGCCTCACCA AGCAGGCTGA
  GCTGTGCTCT AGTCCCTGGA GGTGGCTGTG GTATGTTCCG TATCTGGATG CCTGAAAGAT
  GCCAGCCAAC CAGAGGAACA GGTTCCTCTT CTGAGTCCAT CCTTGACCTC ATCTCCCCCC
  G
  CCACCCCCCT CTTCTCCACC CCCCTCCCCC AGAGAATGGG CTCAAATGTG GCCCAAACAG
  AAGAGAATCT GGAGGGCAGA GGAGACACAG GGTTCTTCCC TCAGGTGCAG TGACTAGGGC
  AGGACGGAAC GCTGGGCCCC AGTGACAGCC TCCACTGCCT AGAAGATGGC GTGAGCTTGT
  CAGGGAGGTG TCCCTCAGGG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/10SnJ	C57L/J	CBA/J	CE/J	FVB/NJ	I/LnJ	KK/HlJ	LG/J	MA/MyJ	NON/ShiLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SEA/GnJ	SJL/J	SM/J	ST/bJ	SWR/J
ss380160407	MGP_WTSI_10_41854846	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	C57BL/6J	C57BL/10SnJ	C57L/J	CBA/J	CE/J	FVB/NJ	I/LnJ	KK/HlJ	LG/J	MA/MyJ	NON/ShiLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SEA/GnJ	SJL/J	SM/J	ST/bJ	SWR/J
rs227467595					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss380160407	MGP_WTSI_10_41854846	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:42011036 () rs orientation: forward

Symbol	Name	Function Class
Rr230194	regulatory region 230194	within coordinates