rs227498511 SNP Detail

Summary

• ID
  rs227498511
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61861972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCACTCTA ACATCTACAT
  GGAGGTGATC ATCTGAAGAA AAAAGGTTCA TTTGGCTTCT GGCTTTGGAG AGCACCTGGC
  CTTTTGCTTT TAGGCCTATG CTAAGGCAGC ATACCATGGA AGGAACATCT GGCAGAACAA
  AACCACTCAT CCCATGGTGG GAAAGAGGTA GTCCAGGCTA GCTCATTTGA ACCCAGGAGA
  R
  GGTCCACATC TGGGCTAAAC AACCCATCAG CTAAGAGCCC TGCCTTGATG GCTTTAGATA
  GGCTGTACTT CTCCATGCTG TGGGAGGACC CTACAACCTA GTGTATCCAG ACAGCAGGGC
  ATCAAGCGTA CAACACACAG CAAATGTCAG ATGTCGGTGC AAGCACAAAT GACAGAGAAT
  GTTCAGCATC CACAGGGTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330462	CHEV_10_61488941	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227498511					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61861972 () rs orientation: forward

Symbol	Name	Function Class
Gm47919	predicted gene, 47919	578 bp downstream
Gm66887	predicted gene, 66887	761 bp downstream
Rr432503	regulatory region 432503	1521 bp distal