rs227551961 SNP Detail

Summary

• ID
  rs227551961
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:60214068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATTCTTTTG CAACCCTCTG GAGTCGTGAT
  GACACACTGA GCCGGTTTGT AGGGGAGTTC AGCGTTGCCT TGGTGGCCTC TAGGCTCTCG
  GCTTCTGAAG AGGAGCAGTG TGGGCTGCTT AGAACCTCAT GGTGCACAGG CCAGGCCCAA
  R
  ACCTCAGCAG CCACTGTAGT CAGCGTGGTA CTTCActgtg cagcagaagc aggccaggtg
  gggttctatt ggccattgca tatgtgggga aactgaggcc cagccaaaca gaagaaatga
  tttgtccaag gacctactat gttcctgaca                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323325212	CHEV_10_59841037	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227551961					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:60214068 () rs orientation: forward

Symbol	Name	Function Class
Cdh23	cadherin related 23 (otocadherin)	within coordinates
Rr432129	regulatory region 432129	1779 bp proximal
Tssr97724	transcription start site region 97724	1933 bp downstream