rs227568648 SNP Detail

Summary

• ID
  rs227568648
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:115535684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGCTATC TGCACCCTTG
  GACAGGTGGG GAAATACGAG CGTGAAAAAT GAAAGGCCAA TTCTCTTCAA GCCCATCTGC
  ATGTAGGCCT ATAAGAGTGA AGGATGCCAG GGCTCCTCTG ACCGTCTTGT GTTTGGATCA
  GTAGCTCCAG GCATAGAGAG AGCAGACCAT AACTGAGACA CGGAGACAGA GACTCTGATG
  Y
  CCACTGAGTC TGAGCTGAAG CGAGTGTTGC AGCTCACAAA GTAAAAGCTG AGGCTTCGAG
  ACCTCCGGCC CATTCAAGAT GGGAAATACA CTCTCTGCTT CTACCAGCTC CTTTCTCTGT
  CCTCTTTCCC CTGCCCTGAG AGGAAAATAT TTACACAGGA TAGGAGACGA ATCAACTGAA
  AAGCTCTGGA CTGTCTTTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323863493	CHEV_11_115506172	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227568648					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:115535684 () rs orientation: forward

Symbol	Name	Function Class
Grb2	growth factor receptor bound protein 2	within coordinates
Rr459979	regulatory region 459979	990 bp distal
Rr459980	regulatory region 459980	1468 bp proximal
Tssr111788	transcription start site region 111788	202 bp downstream
Tssr111789	transcription start site region 111789	357 bp downstream