rs227623051 SNP Detail

Summary

• ID
  rs227623051
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68257361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGCATGTC TACATGTGGA
  TATAAGAGGA CAACATTGGA TATTAGTCTG TAGAAGACAT ACTTTTTGTT TGTTTTTTTT
  TTGTGTTGCT TTGTTTTGTT TTGTTGTGAT ACAGGATCTG TTATTGACTT TGGACCATTG
  TGATTAGGCT AGTCTAGCTA ACCAATTAAT CCCTGGGTCT CCAATGTTGG GAATACTATT
  R
  CATATAACCA GGCCTGGCTT TTTCATGTGG ATCAGAGGAC TGAGTCCACT CTGGTTTTTC
  ACTGTTGTGT AGCAATCACT TTAGTAACAG GGTCTTTTCT CTGGACTGAT TTAAAATATG
  TACTCAAATT TCCCATTGAA CCTCATAAAC CCTCCGACAT ATATGACAAT TTTTATGCCC
  ATTTAAAGGA AAAGAGGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321154314	CHEV_4_68000158	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227623051					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68257361 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	1946 bp upstream