rs227634432 SNP Detail

Summary

• ID
  rs227634432
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81104013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTGCGCC GCCCCAGCCT
  GAGGGGGTCT CCGCGGCTCG CTGCTGCGCC GCCCGCAGCG AGCCGCCAGC CCCTGCCTCC
  TGCGGGACGC CAAGGCGACT CTCGGGGAGA GAGAGAGAAG GAAAGAGAGA GACGGGAGCC
  GCGGGCACCG CCGGCCAGCC GGCCGGCCGC TCGAGCTCTC CCGTGCGACG GCTGCGGAAA
  R
  AGGAAGTGTT GGCGTCCGGG CGCCCGTCCG CGCGGCCGGC TCCTGTCTGG ACGTATGTTC
  GAGGCCACCG AGAGTTGTGC AAGTGCAGCT CCGAGGCCCC GGCGGTCGCC CCCGAAGGGC
  CGCGGCGCCT TTAAGCCCAA AGGCCTGAGT CACGAGGAAG CTCCCTGCCC CTCCCCGCGC
  GCCCCACACC GCTCCACGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322285123	CHEV_7_88599151	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227634432					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81104013 () rs orientation: forward

Symbol	Name	Function Class
Cpeb1	cytoplasmic polyadenylation element binding protein 1	within coordinates
Cpeb1os1	cytoplasmic polyadenylation element binding protein 1, opposite strand 1	1630 bp upstream
Cpgi19352	CpG island 19352	within coordinates
Rr650129	regulatory region 650129	within coordinates
Rr650130	regulatory region 650130	449 bp distal
Rr650131	regulatory region 650131	345 bp distal
Rr650132	regulatory region 650132	400 bp proximal
Tssr73332	transcription start site region 73332	486 bp downstream
Tssr73333	transcription start site region 73333	1121 bp downstream
Tssr73334	transcription start site region 73334	1176 bp downstream
Tssr73335	transcription start site region 73335	1224 bp downstream