rs227637574 SNP Detail

Summary

• ID
  rs227637574
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45026396 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACGCTTGT GCTCTCGATC
  CCGATCACGG TCTCGGTCCC GACGACGTTC CCTCTCACTC CGGTGACTAC GTCGCCTCTC
  CCGGTCTCGA TCCCGGCCCT TCTCCTCTGG GCCATCAGGG CCTTCAGGGC CAAGCTCTCC
  AGGAGGCCCA TCATCAGGAG CTCCATCACC AGCTTCAGAG GGTTCAGCCA TGTCGCCGCC
  S
  CCACCACCAC CACTGCCACC ACCGCCACCA CCTCCTCCAC CTCGAAGCTC CTCTTTTCGC
  TCCCGTTCCC TGCGTGCTCG CTCCCGGCTC CGACTGCTTC GTCGCTTTCG GTCTCGGTCC
  TTGTCCTTGC TACGCTCCCT GGACCGTCGC CGCTCATCCT TGTCTCGACT CCGGGAGCGC
  CTCCTCCGGT CCCGAGAGCG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322200251	CHEV_7_52632342	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227637574					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45026396 () rs orientation: forward

Symbol	Name	Function Class
Snrnp70	small nuclear ribonucleoprotein 70 (U1)	within coordinates
Tssr66520	transcription start site region 66520	198 bp upstream