rs227758865 SNP Detail

Summary

• ID
  rs227758865
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:78181052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGCC CAATCCCTTC TATCTCCCCA
  Y
  GACACCTGTT AGATCTGCCC TAAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319802315	CHEV_1_78200990	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227758865					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:78181052 () rs orientation: forward

Symbol	Name	Function Class
Cpgi455	CpG island 455	209 bp distal
D1Mit215	DNA segment, Chr 1, Massachusetts Institute of Technology 215	1944 bp proximal
Gm33152	predicted gene, 33152	1364 bp downstream
Rr370614	regulatory region 370614	467 bp downstream