rs227783762 SNP Detail

Summary

• ID
  rs227783762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26318431 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTCCCAAA TGTTGGGAGC GCTGGCTTGC
  ACCACCAGGC AAGACTCCAC ATTGATTCTA TTATTATTAA ttttttttaa agatttattt
  gtttatttta tgaatgttct atctgcatgt acacctgcaa gccagaagag ggcatcagat
  Y
  acattataga tagtggtgag acaccatgtg gttactCTTA ACCACTAAAC CAAACCATGT
  CTCCAGGTCT CCAGCCCTCT TATTGTTAAT TTTTTTTTTT GGTGGGGGGt tacgagacag
  ggtttctctg tgtagctctg gctgtcctgg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325339829	CHEV_17_26236402	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227783762					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26318431 () rs orientation: forward

Symbol	Name	Function Class
Gm8186	predicted gene 8186	236 bp upstream
Rr523763	regulatory region 523763	2 bp distal
Tssr146918	transcription start site region 146918	198 bp upstream