rs227804096 SNP Detail

Summary

• ID
  rs227804096
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:149508677 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCTGGTAG AGAAGCACTG
  CTGCCAAGAG CACTTTGAGT CATCTGTCTC ATTCTGCGCT CCCTGTAAAG GAGCTTGGCT
  GCAGGAGCTA CGGCTTTTGC ATATCAATGT AGGCCTGGAA ATGTGAGGCA GAAATGAGTT
  GAAGAAACAG AGTGCAAAAC ACAGAGAGGG AAAGATCAAC TGTGATCCTG AGAAAATCCT
  A
  ACCTTACACC AAATTTGATA GGGTGTCTTC ATTGAAGGAA ACACAGAAAC CAAGGAAGGC
  AGTATCTGTG CTCAGTTTCT GGGGCTGCTG CTGACTTAAG AGTATATGTG CCCATCAGAT
  ATGATGCCAG CATGGGACTT AGGCGAGACA GGAGATCACC CACACAGTAC CAGTGGCCAC
  AAAACCACAC ATCTTATAAA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320560195	CHEV_2_149492493	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227804096					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:149508677 () rs orientation: forward

Symbol	Name	Function Class
Gm53264	predicted gene, 53264	within coordinates
Rr566994	regulatory region 566994	19 bp distal