rs227858773 SNP Detail

Summary

• ID
  rs227858773
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:26807234 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCGTTGCT ACCCACAGCC CAACACCCGT CCGGTGGTTC
  CACTGAGTTG AAAGCAGTCA GACTTCCTGA GTCCCACCTT CTCCAGTGGC CCTAGCCCCG
  A
  GTGGACATGG GACCCCATTT TTTTTGTCCC ACAAATGACA ACAATCAGGG AGGAGAGGGG
  ATGGTATAGA ATGGAAAACA TCTGGTCTAA CTAGTTACA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323954156	CHEV_12_27442100	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227858773					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:26807234 () rs orientation: forward

Symbol	Name	Function Class
Rr259939	regulatory region 259939	34 bp distal
Rr266884	regulatory region 266884	968 bp proximal