rs227866180 SNP Detail

Summary

• ID
  rs227866180
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:66953143 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAATGTGA TTAACACAAG
  AGAAAGGGAG CCGCCGTGTG GGGGCATGTA GTAAGAGAGA ATGGGTGTGA GCCACCGTGT
  GGGTGCTGGG AATTGAGCTC AGGACCTCTG GAAGAGCAGT CAGTGCTCTT AACCACTGAG
  CCATCTCTCC AGCCCCAGGA GTGGATGGTT TTTGTAGGTG GAGACATGTG GGCTCTTTGA
  K
  ATGAGGTCTC ACTGTGTAGT CAAGGCTGGC CTCAGACGCA GACTTGCCTC TGCCCTCTGA
  GTCCTGGGAC TAAAGGTGCG CTCCACTAAC ACTACCCACA CAGACAGGCT CATATATTTT
  GATTGCCTGT GGTGAGTACC GTTAAAATTT CAAGTGAGAG TAAGTTATCA GTTTCAACTA
  GCTAGTCCTC TCTCATCTGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323345129	CHEV_10_66580112	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227866180					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:66953143 () rs orientation: forward

Symbol	Name	Function Class
Gm67716	predicted gene, 67716	1225 bp downstream
Jmjd1c	jumonji domain containing 1C	within coordinates
Rr215833	regulatory region 215833	458 bp proximal