rs227871844 SNP Detail

Summary

• ID
  rs227871844
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69341206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTTT TCTTGGCCAG AAGATGCAAT
  Y
  GTTATCTCTG AGGCATCCTT ATCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324083682	CHEV_12_70395419	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227871844					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69341206 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4692	CpG island 4692	1986 bp proximal
Rr467019	regulatory region 467019	within coordinates
Rr467020	regulatory region 467020	1800 bp proximal
Tssr113629	transcription start site region 113629	1550 bp upstream