rs227923150 SNP Detail

Summary

• ID
  rs227923150
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:99663446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACCCAGAA GAGACTTTTA
  ACATTGTTGA GACTGTTATA GACCATGAGA CTTTTGAAGT TGGACTAAAC TTATTTTGCA
  TTAGGCTATG CCTAGGTGTG GCCTCCATAG ATTCACACAT TTGAACAAGC TTATTGGGAC
  CAGGATGGAA TGTGGTGGTT AGAATATGCT TGGCCCAAGG AGTAACACTA TTAGGAGGTG
  R
  GCTTTGAGAC CTGTTCCTAG CTGCCTGAGG ACAATCTGCT CCTGGCTTCC TATGGATGAC
  ATATAGAACT CTCACTTCCT CCTGCACCAT GCCTGCCTGG ACACTGCCAC GCATTGATAA
  TTATGGACTG AACCTTTGAA CCTGTAAGCC AGCCTCCAAT TAAATGTTGT CCTTATAAGA
  GTTGCCTGGG TCATGGCTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325081756	CHEV_15_99595996	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227923150					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:99663446 () rs orientation: forward

Symbol	Name	Function Class
Cers5	ceramide synthase 5	within coordinates
Gm17058	predicted gene 17058	426 bp upstream