rs227988220 SNP Detail

Summary

• ID
  rs227988220
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:123044730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGCTAGTC TGGCTGCTTT
  GGTTGTGCCC TAAAGGGACA AAGGTGGTGT CTCCCTCCAA GAACCTAGAA TTCTGGCTCT
  GAACCATACA GGGTCCTGGG ATGAGCAAGA GATGCCTTCC ACCTGGCATC CCTTGACCTA
  TTACACGCTA TCGATGCACC TTCTGTGAGA GCCAACCCTT CCCCAGAACA AGCCCCAGGC
  R
  GAGAGAGGCC CCCTGGGAGG AAAAGCCCCA CCCTCCATAG CAGGCTCTTC CCAGATGAAC
  CCAGATCTGC CATTAGTAAG GGCCAGGGTC CAGCCGATAA AGGCTGGCTG TTGCTCCATG
  TCAAAAAATC AATACTCAAC AAGCACAGTC CCAGAGACCA GGGAGGGGCT GCGGAGTCGC
  TGGAGGGGCA GGACTTCAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322850569	CHEV_8_124841891	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227988220					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:123044730 () rs orientation: forward

Symbol	Name	Function Class
Rr366733	regulatory region 366733	1479 bp upstream
Zfpm1	zinc finger protein, multitype 1	within coordinates