rs227989332 SNP Detail

Summary

• ID
  rs227989332
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:138017188 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACAC TAGCAAGCCT CTGTTGCAAG
  R
  ACCGTGATAT AGCCGTCTCT TGTGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320979295	CHEV_3_137974391	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs227989332					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:138017188 () rs orientation: forward

Symbol	Name	Function Class
Adh6a	alcohol dehydrogenase 6A (class V)	1859 bp upstream
Rr586123	regulatory region 586123	195 bp distal
Rr586124	regulatory region 586124	1565 bp proximal
Tssr31974	transcription start site region 31974	1852 bp upstream