rs228014251 SNP Detail

Summary

• ID
  rs228014251
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119181961 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTCCTGA AGCCTATTAT
  TATTATTATA TTATTATAAA TTATTATTTT GTTTTGTTTT TGAGACAGGG TTTCTCTGTG
  TAATAGAGCC CAGCTATCCT GAATCTTGCT TTGTAGACCA GGCTGGCCTA GAACTCACAG
  AGATATCCCA AGTGCTAGAA TTAAAGGCAT GTGCCACTGT GCCTGACAAA ACCAGTAATT
  W
  TTAAATAGAG GATAAATTTA AGCCAGGCAC TGGTATATGC CTGTAAGCCC AACACCTGCA
  AAGGGAAGTG GAGGCAGGAG AGTTCATTCT CTTGAGAACG TAGGAGTTTG AGGCAAGCCT
  GAGTTTCAAG AGATTCTCTG GAAGACACCT AGGAAACACA CATACACACT GGGATTCCTG
  ATTGTGCGAA TGCGCAGGTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323218978	CHEV_9_119262013	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228014251					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119181961 () rs orientation: forward

Symbol	Name	Function Class
Rr688469	regulatory region 688469	489 bp distal
Rr688470	regulatory region 688470	873 bp distal
Rr688471	regulatory region 688471	620 bp distal