rs228140913 SNP Detail

Summary

• ID
  rs228140913
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100575607 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGGTGAAAG CGGCCAAAGA GTTCAACTGC
  AGCGAATTCT TAATTCCTTA AAGAACTCAT TGTAACCCAA CTACTTAGGA AAGGGTAACT
  CTTCAGATGA CTGTCTTCAA GCAAAGAGAC CGAAACCACT CCTACCCGTA TCCTAACAAA
  Y
  TAAGGGAGAA GGGAAACCAA GAtttacact gtgtgcgtga atgttttgcc tatttgtata
  tctgtgtacc gtgtgcatgt ctggtgtcca caaaggtcag aagagggtgc cagatccctt
  ggaactgaaa ttagggaagg tcgagctgcc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325083837	CHEV_15_100508157	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228140913					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100575607 () rs orientation: forward

Symbol	Name	Function Class
Cela1	chymotrypsin-like elastase family, member 1	within coordinates
Rr509796	regulatory region 509796	763 bp distal
Rr509797	regulatory region 509797	916 bp proximal
Rr509798	regulatory region 509798	1126 bp proximal
Tssr136473	transcription start site region 136473	358 bp downstream
Tssr136474	transcription start site region 136474	388 bp downstream
Tssr136475	transcription start site region 136475	447 bp downstream
Tssr136476	transcription start site region 136476	1109 bp downstream