rs228159582 SNP Detail

Summary

• ID
  rs228159582
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59753785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggacggtgg ggggtgtgct cctttaattc
  tagcaccagg gaggcagaga caggtggagc tctgagtttg aggcctacac agtgttggtc
  tacagtgtga gttccaggtt agccagggct acagagtaat cttgtctTTG TTGGGGTAGG
  K
  TTACAGGATG CAGGAGAAAG ACTGCCAGTT GAGGAACTAA CACTAGGGGC TAGTATATAG
  TAAGGGATGA GCCTTGAAGA TAGTCTTACA GACTTTGAAG ATGGTATTAG CATGTATAAA
  GTTACTGTGA GCTAATGAAA CCACTTAAGT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324357404	CHEV_13_59707332	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228159582					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59753785 () rs orientation: forward

Symbol	Name	Function Class
Gm47246	predicted gene, 47246	309 bp downstream
Naa35	N(alpha)-acetyltransferase 35, NatC auxiliary subunit	within coordinates
Rr276812	regulatory region 276812	385 bp distal
Rr279913	regulatory region 279913	2 bp distal