rs228283781 SNP Detail

Summary

• ID
  rs228283781
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70182519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tttgccatg acttcccctc cctaccgtgg
  tagacagaca acctggaacc atgaattaaa atgaatcttc ctttcctttg tttacgccag
  ctgttctatc gcagcagtga aacaaaagct ggctgacaTA GAATTTCATT GCAAAGGATC
  K
  CTGAGACGGA ACCAGACCTT CGTGATGTAA GACTGACAGC TCTTACTTTT ATGAACCCCC
  TGGGTGGAGG TGATGCCAGT ATCCCGGTTT GTAGCTTTCA AGTGGGCTTC TGTTTTAGAG
  TCACCCTAAA GAGCGCATTT CTGATGAGAC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324086842	CHEV_12_71236732	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228283781					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70182519 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4707	CpG island 4707	876 bp distal
Gm56526	predicted gene, 56526	within coordinates
Rr403332	regulatory region 403332	619 bp upstream
Rr467201	regulatory region 467201	350 bp proximal
Rr467202	regulatory region 467202	544 bp proximal
Tssr116556	transcription start site region 116556	516 bp downstream