rs228287061 SNP Detail

Summary

• ID
  rs228287061
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13377722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGAGATA TAATTTATTA
  AATAATTGGT ATAATAATTA AATTCACTCA TTTAATGTGT GAATTGGGTT TTTATTATCT
  TTTTAGCTTT TGAAAACTCA GATACATACA AACAAACACA CACACATGTG TGTGTGAGTG
  TGTGTGTGCA CACGCGTGCA TGCATGTGTG TGTGTGTGTG TGTGTGTGTG CGCGCGCGCG
  M
  GTGCTCGAGT GAAGTTTATC TTTTGTTTTG AGACAAGGTG TCTCTGTATA GCCCTGGCTG
  TCCTGGAACT CACTATGTAG ACCAGGCTGG CCTCAAACTC ACAGAGACCT GCCTGCCTCT
  GCCTCTGCCT CTGCCTCTGC CTCTGCCTCT GCCTCTGCCT CTGCCTCTGC CTCTGCCTCT
  GCCTCTGCCT CTGCCTCTGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322506196	CHEV_8_13327722	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228287061					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13377722 () rs orientation: forward

Symbol	Name	Function Class
Rr175520	regulatory region 175520	722 bp distal
Rr175521	regulatory region 175521	1079 bp proximal
Rr180371	regulatory region 180371	1722 bp distal
Rr180372	regulatory region 180372	721 bp distal