rs228291199 SNP Detail

Summary

• ID
  rs228291199
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172696036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    catagagac atatacacac atacacagac
  acacagacac atagacacag agacacatac acacagacac acagagacag ataaagacag
  gcagacatac acacacacac acacacacac acacacacac acacacacac acacacacaa
  R
  ggtgttggca agaggaaATA GGTCAGCTGG TAGCACAGGG CAATGGTCCA GGTAGTCTAT
  CTGGATGCTG GCTGCAGGCC TGCTAGCCTC TGTTCTCCCC TTCTGCATTG TCCTTGGACT
  CCCCAGAGCC AGGGCCTGCC CCCAAACATG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320620541	CHEV_2_172679744	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228291199					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172696036 () rs orientation: forward

Symbol	Name	Function Class
Gm36254	predicted gene, 36254	within coordinates
Rr571755	regulatory region 571755	within coordinates
Rr571756	regulatory region 571756	114 bp proximal