rs228361428 SNP Detail

Summary

• ID
  rs228361428
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84353870 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACCCTTC TCTGATTCAT
  CACTTTGTCT GCCCCTCAAT TAGACCTGAC TTTCAAACAT GACTGCTTCC TTCTAAAAAC
  TGTGTGTCCT AAGGGCCTAG CTATATGCCA GCTAGAGAAA TTAAAAGTCT ATGGCATGCC
  TGCACTCCAG ATGGATCAAT CACACAGACC TTGAAGGTCT TTGGATGTGA TCCCTTGCCA
  A
  AGCAGCCATA TTGCTGGATT AAAATTCCTC TACAAAATCA AAATTAAAGA AGAAAAGGCA
  TTTTTCATGT TCTTTCCTGG GAGGAGCTTA GACAAATGGC CAATGACCAG AAGTCAATGT
  CGGAAGTCAT AAGACCACAC ATGGTCATAA GACCACACAT GGCCCACCCA GCAGCACAAT
  TGGAATTTAC CAACTGGTAG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260794	CHEV_16_84557227	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228361428					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84353870 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	1300 bp upstream
Rr518505	regulatory region 518505	1271 bp proximal
Rr518506	regulatory region 518506	1372 bp proximal
Tssr139145	transcription start site region 139145	167 bp upstream