rs228400955 SNP Detail

Summary

• ID
  rs228400955
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:85849118 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGATAAAAC TCTTTTCCAA
  GTGTGGTAAG AATTGTTTAC AAAATGCAAA AGTCTATCAA GGGTACCAAC TGCCTAAATA
  CCATCATTTG ATATTGGTTA TACCAAAAAA GATGAGGTAA AAAATGGATT TCATAATACC
  ACTTTAATGC AATTATATGT GATACAATGT AAAGGCTGTG AAATTGGTTA ATTTGGGTTT
  C
  TTGTTCTCTA AAGGAAAAAG AAACTGATGC TAATACAGTT GGAGAGTGAA AGCAGGAAGA
  CATTTGCATC TTTTAGGGGG ACTCTTACTT TGTTCATCTG AAGATTAGTG TGGGCAGTAT
  GATGCTCAGG ATTTCACAGT AAGGGAGAGC CAAAAATAAT GCTCTATTTG TATTATTGCA
  GGAATCTTTT ATGGAGTCTG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325265514	CHEV_16_86052475	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228400955					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:85849118 () rs orientation: forward

Symbol	Name	Function Class
1700007H22Rik	RIKEN cDNA 1700007H22 gene	893 bp downstream