rs228455750 SNP Detail

Summary

• ID
  rs228455750
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:35023267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTAACTATA GCTGAATTTT
  CCCATTCCCA GAGCTCCAGG ACCCTTCCAG TCTATGTCAC CAATCATTCC ACAAATCCTC
  AACATCAGTG CATGCCCAGC CCAGCATGCC CCCTCCTGGG CCGGCGCGAT GACCTCAAAA
  GGACAAGATG GGATCTTTGA TGAACCCCTC TGGCACTGAG TCAGCCCAGC CCAGGCATCA
  Y
  GGAGCATCAG ACAGGAGAGG TAACCCTGTC TAAACCCAGA CACTGGGTGG GTGCCCAGGT
  TCAGACAGCA ATAGAGCCCC TCCCCTTCCC CACGTGTCTC AACGGTTGCC CAAGAAAGTC
  TTTTCAGCCT TGTGGGAGCC GGCTGCATTT CCAAGGAAAA GGGGAGCAGG CAGGCGGGGC
  AGATGGAAGT AATTACCGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322899079	CHEV_9_34919556	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228455750					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:35023267 () rs orientation: forward

Symbol	Name	Function Class
Rr206179	regulatory region 206179	within coordinates
Rr383192	regulatory region 383192	within coordinates
St3gal4	ST3 beta-galactoside alpha-2,3-sialyltransferase 4	within coordinates