rs228528104 SNP Detail

Summary

• ID
  rs228528104
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32610035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGATTATTA TAACTTTTTG AAGTATTTTT
  TTCTGGACTG TACTGCATTT ATGTAAATAT GCCCATACCT CGGATGAGAA TCCAGAGGCA
  CCAACACGTT AAGACAATTA GGCAAAATTC TGCACGGAGC CAGAAGCTGA AGGAAGCTGA
  R
  TCTGTTTCTA ACGTGTCAGA TCCATACAGT GAGCAATATT GCAAGTTACC TTTGGAGGCT
  CAGTAAAGAA GTTTCAATGG AGACTTCAAT TTTTAGGTGC AAAGATAGAA GTAAGCCCTG
  GCCAGGACTT CTTTGGTAGT CTTGGCTAAC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322892006	CHEV_9_32506324	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228528104					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32610035 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr206170	regulatory region 206170	434 bp distal
Tssr84276	transcription start site region 84276	1863 bp downstream
Tssr84277	transcription start site region 84277	1728 bp downstream
Tssr84278	transcription start site region 84278	800 bp downstream
Tssr84279	transcription start site region 84279	465 bp downstream
Tssr84280	transcription start site region 84280	671 bp upstream
Tssr84281	transcription start site region 84281	1072 bp upstream
Tssr84282	transcription start site region 84282	1151 bp upstream
Tssr84283	transcription start site region 84283	1531 bp upstream