rs228536659 SNP Detail

Summary

• ID
  rs228536659
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127758066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTTCACGAT ACTTTTCTAA
  CTGAGTTGTC CTACATACAA GCACATGTTC TTAATGTTGT CTGTCTTCTG TGCTGTTCCT
  GTAAGTTTGC TATTAAAATA CATTAAGCAA ACAAACAAAA AGCAAGTTGA GCAAGCCATT
  TAACAATACC TCTTCATGAC TTCCACTTCA GTCCTTGCCT CCAGCTTCCT CCTGCCTTGA
  R
  TCCCTGCCCT GATTCCTTTC AGGGATAGAC TTACCTGAAA GTGTAAGCTG AAATAAACCC
  TCTCCTTCTC AGGTTGCTTT TGGTCATGGT GGTTTATCAC CGCAGGAGAA CCCCTAAGAC
  AATCAAAGAC TGGATAAGTT ACAAAGAAGG AAGTTTATTT TGGTTCACAG CTCCAACCCA
  ACCCAAGGTC AAAGGGTAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323530656	CHEV_10_127359253	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228536659					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127758066 () rs orientation: forward

Symbol	Name	Function Class
Gm15905	predicted gene 15905	831 bp downstream
Gm40804	predicted gene, 40804	within coordinates