rs228561870 SNP Detail

Summary

• ID
  rs228561870
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:95723822 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGATACCT GGATTCCAGA
  GTCCCTTCCA TTGTTCTGGA TAAATCCCTG CTGCCTCCTA GCTACCATGA TGCTGTAAAG
  GAAGCCTGAG CCAGGGACCG TGGATGTGTT ACAAGTTAGC ACCACAGGAA GGGCCTGTGG
  GCAAGGTCAG TTAAGGAAGT AACCAAGGCT AGTTCACTCC TGCTTGGTGA TGATCCCTAG
  Y
  CTTCCTAGCC GCCCCCCTCC CCAATGTGCA TGCCTAGTTG TAGGAAGAGG AAGCTGCAGA
  ATGGTCAGCC ACTGAGGCCT TCTAAGGGCA CCTTTTGTAC CCACAGGTCT TCTGCTGGGC
  TGGCGCTCAA TGCCCACAGC TCCCCTCCCT CAGTTTCCCC ATGGGGCAGG GCTTGGCAGA
  GGGTATTGCA GCTCATGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322809842	CHEV_8_97521094	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228561870					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95723822 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adgrg1	adhesion G protein-coupled receptor G1			Intron
				Noncoding-Transcript-Variant
Tssr78951	transcription start site region 78951			1573 bp downstream
Tssr78952	transcription start site region 78952			1500 bp downstream
Tssr78953	transcription start site region 78953			1446 bp downstream
Tssr78954	transcription start site region 78954			1433 bp downstream