rs228624880 SNP Detail

Summary

• ID
  rs228624880
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97446466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATACAGAA GTGGATGCTC
  ACAGTTATCC ATTGGAAGGA GCACAAGGTC CCCAATGAAG GAGCCAGAGA AATACCCAGG
  GAGCTGAAAG GGACTGAAGA CTGAAAGAAG GAACATCAAT ATGAACTAAC CAGCACCCCT
  AGAGTTCCTT GGAACTATAC CATCAATCAA AGAAAACACA TGGTGGAACT TGTAGCTCTA
  R
  CTACATTTGT AGCAGAGGAT GGCCTAGACG GTCATTAATG GGAAGAGGGG CCCTTGGTCC
  TGTGAAGGCT CTATGCCCCA GTATAGGGGA ATGCCAGGAC CAGGAATGGG AGTGGGTGGG
  TTGGAAGCAG GAGGAGGAGG AAGGGGGGAG GGATTTTTGG AGGGGAAACT AGGAAAGGGG
  ATAGCATTTG AAATGTAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324130795	CHEV_12_98718417	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228624880					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97446466 () rs orientation: forward

Symbol	Name	Function Class
Rr387670	regulatory region 387670	within coordinates