rs228651433 SNP Detail

Summary

• ID
  rs228651433
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:99140537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAGAAGAA GAATGCAAAG
  TGGAATAACT TAGAAAATAT AAGGCAACTT AAAAAATTAA AAGAGTGATA TGCAAAATGC
  AGAGGGAAAG AGGAAAAAAG AAGCTGCAGA GAAAGTGGAA GGAGCAGGCA GGCTTCTCCT
  TACCATGGGA CAGAACAGGT CTTTTCTTAA TAGCAAAGCA GGCTTAGTCT TACTAAAGAG
  K
  ACAAAGATTT CTTCTTACAG ACTTGGGTTT ATTCATTTAG CAATAAAAGG GTAGAAGCTT
  TTTCTTTCTC AATGCAATAA AGATTGGGGC ACATTTTTCC TCCAGAATGA GTGAGTTCTG
  CACTGGGGCT TTGTCTTTTT CTCCATATAC ATAAGTAAGT ATGGGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323135171	CHEV_9_99158903	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228651433					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:99140537 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cep70	centrosomal protein 70			Intron
				Noncoding-Transcript-Variant
Gm47199	predicted gene, 47199			991 bp downstream
Rr383815	regulatory region 383815			734 bp downstream
Rr685374	regulatory region 685374			1170 bp distal