rs228700413 SNP Detail

Summary

• ID
  rs228700413
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:19600717 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGCATCAG CTCCTGCCTT
  CAGGCCCCAG CCCTGCTTGA CTTCCTGTTC TGCCTTCCTC TAGTGATGAT CTATGGTCTG
  GAAGTATAAG CTGGATAAAC CCTTTCCTCC CCAACTTGCT TTTTGCTCAT GGTGTTTTCA
  TTGCAGCAAT AGAAACTCTA GCTAAGACCC CAAACATGCA CATCTTTATT TCTGACAGTC
  W
  TCTCTAACTG GCTTTTTAGG GGTGAAAGGT TATTAAAGAA AGGGAAGACA GAGTGGCTGG
  TCCATTCTCA CAAAGTCAGT CATGGTAACC AGGAACATCA TTCTTAGTTC TAATATTGCA
  AGCGTCGTGC TAGGAAGTCC CTAGATCCCA GGAAAATCTG GAGTGTTCCC TAACATGATT
  TTAGCATTAA GTCATTGTGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323588555	CHEV_11_19550720	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228700413					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:19600717 () rs orientation: forward

Symbol	Name	Function Class
D11Hjk21	DNA segment, Chr 11, H. Jockusch 21	481 bp proximal
Gm12027	predicted gene 12027	within coordinates
Rr249245	regulatory region 249245	485 bp proximal