rs228704892 SNP Detail

Summary

• ID
  rs228704892
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:73978584 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT GTGTGTGTGT GTGTGTGCAC
  R
  TGTGTGTTTT AGTGTTTTAG TTGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324099311	CHEV_12_75032797	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228704892					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:73978584 () rs orientation: forward

Symbol	Name	Function Class
Hif1a	hypoxia inducible factor 1, alpha subunit	within coordinates
Rr467875	regulatory region 467875	341 bp distal
Tssr113854	transcription start site region 113854	1099 bp downstream
Tssr113855	transcription start site region 113855	239 bp downstream