rs228734583 SNP Detail

Summary

• ID
  rs228734583
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:96486303 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    attctaact tgtttagatg ttcccattcc
  aaagaaactt tctaggtcca taagaaaagc cattgttgag tcatcaaact gacaatagct
  tacttagctt ttaggaagat ttatatgtat ttcaaaatga cagataaagc actcagattg
  Y
  gtagctttct aaataaactc tttaagacaa ggatgggGCA CCTTTACTTG CCTCCCAGCA
  GCAGAATGGG GGCTTCTGCT TTTACTCTTT CCTCTTATGA AAAGCTCTGT GAAGCTCTGG
  AGCTGCACAT AACTGCCAAA GAATTCATAT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319853049	CHEV_1_98455155	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228734583					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:96486303 () rs orientation: forward

Symbol	Name	Function Class
Gm29601	predicted gene 29601	1807 bp upstream
Gm70795	predicted gene, 70795	1289 bp downstream
Tssr13063	transcription start site region 13063	1850 bp upstream