rs228737751 SNP Detail

Summary

• ID
  rs228737751
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117551088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGCATGGGG GATGCTAGAG
  CCACGTGAGG CAGGAGTGGG TAAGTGGGTG GCGGAGCACC CCCATAGAGG CAAAGGAGAG
  GAGGAAGAAG GGGGATTGGA TTGAGAGATT GTGGAGGGGT AACTGGGAAG GGGGATATCA
  TTTAAAATGT AAATGAATAA AAAGATTAAT TAAAAAAAAA AAGTCTCTGT TTCCCAGGGA
  Y
  GAAAGATAGG GCTTCTCAGA GGGAGCCACT GACAGCAGGC TGTCAATCAT TGGGGGCTTT
  GACAAAGTGA GGGTAAGGCC AGAGCTGAGT CAGGTCCTGG AATTTCCTGG AGGCCCCACC
  AAATAGAGTG AAACTAACAT AGCAGCCAAT CAGAAACCAA CCCATGTGAC TTCCTGGCAC
  TCGCCAATGA AGTTTTAGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323498920	CHEV_10_117152239	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228737751					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117551088 () rs orientation: forward

Symbol	Name	Function Class
Gm66624	predicted gene, 66624	780 bp downstream
Gm67727	predicted gene, 67727	1449 bp upstream
Rr385358	regulatory region 385358	1813 bp upstream
Tssr99470	transcription start site region 99470	55 bp downstream