rs228753947 SNP Detail

Summary

• ID
  rs228753947
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:41494656 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATCAGCAG AACTATACCA
  GGAAGAGAAG GGGGATGATG CTGTCAGCCC TGGCCTTGGA GGCCCTCATA GGAGTTCCCA
  GCTTACACAG GACTGGGGAC AGAGGCTGGA GCAAGAAGCA CGTGCTAATC AGCTTTGGCC
  AAAGTGTGGT CTGGTTGATC ATTATCCTAG GATTGGTCTG GCAGGCCTTG TTCAGTTGCC
  R
  GGGGTTAGGG GGTAGTTTTG ATCCTTGTCA CAGATGTTTA TCCAGGGGCT CTGTTGTTCC
  TGGAATCCAC CAGACTGTAA TGACTCCGTG CAAAGGGAAC AGGTGCAAAC TGGAGTCATC
  ATACCAAGCT TTTGTTCTGG TTTTTAGTTA ACCCATTGGG CACCCGGAGG GCCAAGAGAA
  GAGTCAATGC TTTTAGCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321092817	CHEV_4_41441689	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228753947					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:41494656 () rs orientation: forward

Symbol	Name	Function Class
Myorg	myogenesis regulating glycosidase (putative)	948 bp downstream
Rr590654	regulatory region 590654	within coordinates
Rr590655	regulatory region 590655	1076 bp proximal
Tssr41339	transcription start site region 41339	1663 bp downstream