rs228851574 SNP Detail

Summary

• ID
  rs228851574
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:105157423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAAAGGCGG CATCACCTGT GGGAGGAGAG GTTGCTCACT
  GCAATTAAGC CTCCTCTCTG AAAGATGCTA TTAAGATGGC CTGAAGACTA GTCACAGGAC
  R
  GGAGAAAATA TTTACAAAAC ACATGTCTGA TAAAGGAGTT ATATTCAAAG TATACACAGA
  GCTTGTGAAC TCAATGATAA GAAAACAATT TAATCTAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321243508	CHEV_4_104972831	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228851574					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:105157423 () rs orientation: forward

Symbol	Name	Function Class
D4Mit306	DNA Segment, Chr 4, Massachusetts Institute of Technology 306	428 bp distal
Rr596588	regulatory region 596588	600 bp distal
Rr596589	regulatory region 596589	1385 bp proximal
Rr596590	regulatory region 596590	1578 bp proximal