rs228892993 SNP Detail

Summary

• ID
  rs228892993
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7630760 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGAGGTAG ACATTATGTG
  TCCTTGGTTG CTACTAACCT TAGTTCTTGG GACCAAGATC TCGGGACTGA ACCCGGAGCT
  CATGGTCCTG GCCCTCCTGG CTACTAGCCA ATGGCTCCAC GGATCTTTCT GCCTCTGCCT
  CTGCCTCTGC CTCCCCAGTA CAGGAATTAT ACATGCACAT TACCTTTCCC TGATTTAAAA
  M
  AAAACAAAAC AACAAAACAA AACAAAACAG AAAACAACAA AAAAACATGG GTTGAGGGTT
  CAAACTGGGG TCCTCGTGCT CAGCCTAGAA AGTGCTTTAA TGACAGAGCC ACTTCCTCCA
  CCCCAGTACC TAGCTACGGC TTCCTTTTGG TAGTGTTGTG GGCTGATCGT GTGGCCTTGT
  GTTTGCTAAG GATGCACAAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325291027	CHEV_17_7567710	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228892993					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7630760 () rs orientation: forward

Symbol	Name	Function Class
Gm49630	predicted gene, 49630	within coordinates
Gm64723	predicted gene, 64723	within coordinates
Rr336065	regulatory region 336065	1560 bp distal
Unc93a2	unc-93 homolog A2	within coordinates