rs228955197 SNP Detail

Summary

• ID
  rs228955197
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:132885628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    aaCAAACAA CAGAAACAAA ACCAAGGAAT
  TCATTCCTTT ATCTTTCAAG ATCTAAAATG ATGTTTTGGG TTTTTTTTAA GCTTTCTCTc
  tgtgtggtgg tggcacatgc ctttattccc accacttgag agggaaaggc aggtagatct
  Y
  tgggtttaag gccagcttgg tctacacagt tataggacag acagggccac acagagaaac
  tctgtctcat ctcaaaaaaa caaaGCAAGC AAACAAGTCA TTCCCAtatt ttttgtctgt
  ctctgctgct aaaatgtaaa ctgcgaatca                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319978138	CHEV_1_134854467	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs228955197					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:132885628 () rs orientation: forward

Symbol	Name	Function Class
Rr19288	regulatory region 19288	173 bp proximal
Tssr8757	transcription start site region 8757	160 bp upstream